J3_9R9O_020
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUC*GAA*UAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 9R9O|1|C1|A|2703, 9R9O|1|C1|A|2705
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9O|1|C1|C|2664
9R9O|1|C1|U|2665
9R9O|1|C1|C|2666
*
9R9O|1|C1|G|2690
9R9O|1|C1|A|2691
9R9O|1|C1|A|2692
*
9R9O|1|C1|U|2701
9R9O|1|C1|A|2702
9R9O|1|C1|A|2703
9R9O|1|C1|A|2704
9R9O|1|C1|A|2705
9R9O|1|C1|G|2706
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain C4
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LJ
- 60S ribosomal protein L11-A
- Chain LT
- 60S ribosomal protein L21-A
- Chain Lo
- 60S ribosomal protein L42-A
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