J3_9R9P_011
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAA*UGAUAAC*GUC
- Length
- 14 nucleotides
- Bulged bases
- 9R9P|1|C1|U|1840, 9R9P|1|C1|A|1841, 9R9P|1|C1|A|1842
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9P|1|C1|G|1488
9R9P|1|C1|A|1489
9R9P|1|C1|A|1490
9R9P|1|C1|A|1491
*
9R9P|1|C1|U|1837
9R9P|1|C1|G|1838
9R9P|1|C1|A|1839
9R9P|1|C1|U|1840
9R9P|1|C1|A|1841
9R9P|1|C1|A|1842
9R9P|1|C1|C|1843
*
9R9P|1|C1|G|1852
9R9P|1|C1|U|1853
9R9P|1|C1|C|1854
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Lg
- 60S ribosomal protein L34-A
- Chain Lj
- 60S ribosomal protein L37-A
- Chain Ll
- 60S ribosomal protein L39
Coloring options: