J3_9RHU_007
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUU(PSU)
- Length
- 18 nucleotides
- Bulged bases
- 9RHU|1|A1|G|992
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|A|939
9RHU|1|A1|U|940
9RHU|1|A1|U|941
9RHU|1|A1|C|942
*
9RHU|1|A1|G|986
9RHU|1|A1|G|987
9RHU|1|A1|A|988
9RHU|1|A1|C|989
9RHU|1|A1|C|990
9RHU|1|A1|A|991
9RHU|1|A1|G|992
9RHU|1|A1|A|993
9RHU|1|A1|G|994
*
9RHU|1|A1|C|1001
9RHU|1|A1|A|1002
9RHU|1|A1|U|1003
9RHU|1|A1|U|1004
9RHU|1|A1|PSU|1005
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain F1
- eS26
- Chain M1
- 40S ribosomal protein S3a
- Chain Y1
- Small ribosomal subunit protein uS15
- Chain Z1
- Small ribosomal subunit protein uS11
- Chain k2
- 60S ribosomal protein L37a
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