J3_9RHU_019
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGAUAGUCAACAAGUAC*GGAAAG*CUCG
- Length
- 27 nucleotides
- Bulged bases
- 9RHU|1|A3|U|354, 9RHU|1|A3|A|362, 9RHU|1|C3|C|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A3|C|351
9RHU|1|A3|G|352
9RHU|1|A3|A|353
9RHU|1|A3|U|354
9RHU|1|A3|A|355
9RHU|1|A3|G|356
9RHU|1|A3|U|357
9RHU|1|A3|C|358
9RHU|1|A3|A|359
9RHU|1|A3|A|360
9RHU|1|A3|C|361
9RHU|1|A3|A|362
9RHU|1|A3|A|363
9RHU|1|A3|G|364
9RHU|1|A3|U|365
9RHU|1|A3|A|366
9RHU|1|A3|C|367
*
9RHU|1|A3|G|374
9RHU|1|A3|G|375
9RHU|1|A3|A|376
9RHU|1|A3|A|377
9RHU|1|A3|A|378
9RHU|1|A3|G|379
*
9RHU|1|C3|C|21
9RHU|1|C3|U|22
9RHU|1|C3|C|23
9RHU|1|C3|G|24
Current chains
- Chain A3
- 28S rRNA
- Chain C3
- 5.8S rRNA
Nearby chains
- Chain F3
- Large ribosomal subunit protein uL4
- Chain G2
- Choriogonadotropin subunit beta variant 1,Genome polyprotein,Genome polyprotein
- Chain U2
- Ribosomal protein L26
- Chain f2
- Ribosomal protein L37
- Chain h2
- 60S ribosomal protein L39-like
Coloring options: