J3_9RHU_030
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGA(PSU)
- Length
- 26 nucleotides
- Bulged bases
- 9RHU|1|A3|C|2313, 9RHU|1|A3|A|2315, 9RHU|1|A3|G|2318
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A3|A|2294
9RHU|1|A3|G|2295
9RHU|1|A3|A|2296
9RHU|1|A3|U|2297
9RHU|1|A3|G|2298
9RHU|1|A3|G|2299
*
9RHU|1|A3|C|2308
9RHU|1|A3|G|2309
9RHU|1|A3|U|2310
9RHU|1|A3|U|2311
9RHU|1|A3|C|2312
9RHU|1|A3|C|2313
9RHU|1|A3|G|2314
9RHU|1|A3|A|2315
9RHU|1|A3|A|2316
9RHU|1|A3|G|2317
9RHU|1|A3|G|2318
9RHU|1|A3|G|2319
*
9RHU|1|A3|C|2344
9RHU|1|A3|A|2345
9RHU|1|A3|G|2346
9RHU|1|A3|C|2347
9RHU|1|A3|C|2348
9RHU|1|A3|G|2349
9RHU|1|A3|A|2350
9RHU|1|A3|PSU|2351
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain C2
- Large ribosomal subunit protein eL8
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D3
- Large ribosomal subunit protein uL2
- Chain J2
- Ribosomal protein L15
- Chain T2
- Large ribosomal subunit protein uL23
- Chain f2
- Ribosomal protein L37
Coloring options: