J3_9RHU_031

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9RHU|1|A3|U|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|A|2394
9RHU|1|A3|G|2395
9RHU|1|A3|A|2396
9RHU|1|A3|U|2397
9RHU|1|A3|G|2398
*
9RHU|1|A3|C|2415
9RHU|1|A3|A|2416
9RHU|1|A3|G|2417
9RHU|1|A3|U|2418
*
9RHU|1|A3|A|2600
9RHU|1|A3|G|2601
9RHU|1|A3|G|2602
9RHU|1|A3|G|2603
9RHU|1|A3|U|2604
9RHU|1|A3|G|2605
9RHU|1|A3|U|2606
9RHU|1|A3|A|2607
9RHU|1|A3|A|2608
9RHU|1|A3|A|2609
9RHU|1|A3|U|2610

Current chains

Chain A3

28S rRNA

Nearby chains

Chain V2

60S ribosomal protein L27