J3_9RHU_034

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

9RHU|1|A3|G|3804

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|3669
9RHU|1|A3|G|3670
9RHU|1|A3|G|3671
*
9RHU|1|A3|C|3802
9RHU|1|A3|U|3803
9RHU|1|A3|G|3804
9RHU|1|A3|A|3805
9RHU|1|A3|C|3806
*
9RHU|1|A3|G|3914
9RHU|1|A3|G|3915
9RHU|1|A3|A|3916
9RHU|1|A3|C|3917
9RHU|1|A3|A|3918
9RHU|1|A3|G|3919

Current chains

Chain A3

28S rRNA

Nearby chains

Chain C2

Large ribosomal subunit protein eL8

Chain D3

Large ribosomal subunit protein uL2

Chain J2

Ribosomal protein L15

Chain e2

Large ribosomal subunit protein eL36