J3_9ROV_006
3D structure
- PDB id
- 9ROV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUCAG*CGCAAGU*AAAGACG
- Length
- 20 nucleotides
- Bulged bases
- 9ROV|1|A|U|1270
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9ROV_006 not in the Motif Atlas
- Homologous match to J3_6CZR_023
- Geometric discrepancy: 0.5713
- The information below is about J3_6CZR_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.2
- Basepair signature
- cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9ROV|1|A|C|1268
9ROV|1|A|U|1269
9ROV|1|A|U|1270
9ROV|1|A|C|1271
9ROV|1|A|A|1272
9ROV|1|A|G|1273
*
9ROV|1|A|C|1302
9ROV|1|A|G|1303
9ROV|1|A|C|1304
9ROV|1|A|A|1305
9ROV|1|A|A|1306
9ROV|1|A|G|1307
9ROV|1|A|U|1308
*
9ROV|1|A|A|1317
9ROV|1|A|A|1318
9ROV|1|A|A|1319
9ROV|1|A|G|1320
9ROV|1|A|A|1321
9ROV|1|A|C|1322
9ROV|1|A|G|1323
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 1
- 28S ribosomal protein S35, mitochondrial
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
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