J3_9RTU_013
3D structure
- PDB id
- 9RTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- 9RTU|1|A|A|2198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTU_013 not in the Motif Atlas
- Geometric match to J3_8B0X_021
- Geometric discrepancy: 0.0842
- The information below is about J3_8B0X_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17460.1
- Basepair signature
- cWW-tHH-cWW-F-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9RTU|1|A|C|2091
9RTU|1|A|U|2092
9RTU|1|A|G|2093
*
9RTU|1|A|C|2196
9RTU|1|A|U|2197
9RTU|1|A|A|2198
9RTU|1|A|A|2199
9RTU|1|A|C|2200
*
9RTU|1|A|G|2223
9RTU|1|A|G|2224
9RTU|1|A|A|2225
9RTU|1|A|C|2226
9RTU|1|A|A|2227
9RTU|1|A|G|2228
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L9
- Chain X
- 50S ribosomal protein L28
Coloring options: