J3_9RTV_025
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 9RTV|1|a|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTV_025 not in the Motif Atlas
- Homologous match to J3_6CZR_018
- Geometric discrepancy: 0.2225
- The information below is about J3_6CZR_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.3
- Basepair signature
- cWW-tSH-F-tWW-tHS-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9RTV|1|a|C|826
9RTV|1|a|U|827
9RTV|1|a|U|828
9RTV|1|a|G|829
*
9RTV|1|a|C|857
9RTV|1|a|G|858
9RTV|1|a|G|859
9RTV|1|a|A|860
9RTV|1|a|G|861
*
9RTV|1|a|C|868
9RTV|1|a|G|869
9RTV|1|a|U|870
9RTV|1|a|U|871
9RTV|1|a|A|872
9RTV|1|a|A|873
9RTV|1|a|G|874
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S8
- Chain u
- 30S ribosomal protein S21
Coloring options: