J3_9RTV_031
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTV_031 not in the Motif Atlas
- Homologous match to J3_6CZR_023
- Geometric discrepancy: 0.1408
- The information below is about J3_6CZR_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.2
- Basepair signature
- cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9RTV|1|a|C|1063
9RTV|1|a|G|1064
9RTV|1|a|U|1065
9RTV|1|a|C|1066
9RTV|1|a|A|1067
9RTV|1|a|G|1068
*
9RTV|1|a|C|1107
9RTV|1|a|G|1108
9RTV|1|a|C|1109
9RTV|1|a|A|1110
9RTV|1|a|A|1111
9RTV|1|a|C|1112
9RTV|1|a|C|1113
*
9RTV|1|a|G|1187
9RTV|1|a|A|1188
9RTV|1|a|U|1189
9RTV|1|a|G|1190
9RTV|1|a|A|1191
9RTV|1|a|C|1192
9RTV|1|a|G|1193
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain c
- Small ribosomal subunit protein uS3
- Chain e
- 30S ribosomal protein S5
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: