J3_9SUM_007
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UC*GAGGACAGCG*CUAGGA
- Length
- 18 nucleotides
- Bulged bases
- 9SUM|1|A|U|553
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_86133.3
- Basepair signature
- cWW-cWW-F-F-F-cWS-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9SUM|1|A|U|451
9SUM|1|A|C|452
*
9SUM|1|A|G|538
9SUM|1|A|A|539
9SUM|1|A|G|540
9SUM|1|A|G|541
9SUM|1|A|A|542
9SUM|1|A|C|543
9SUM|1|A|A|544
9SUM|1|A|G|545
9SUM|1|A|C|546
9SUM|1|A|G|547
*
9SUM|1|A|C|552
9SUM|1|A|U|553
9SUM|1|A|A|554
9SUM|1|A|G|555
9SUM|1|A|G|556
9SUM|1|A|A|557
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4-A
- Chain H
- 60S ribosomal protein L6
- Chain I
- 60S ribosomal protein L7
- Chain g
- 60S ribosomal protein L32
Coloring options: