J3_9SUM_016
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CA*UAACU*AG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_05348.4
- Basepair signature
- cWW-cWW-cWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9SUM|1|A|C|1571
9SUM|1|A|A|1572
*
9SUM|1|A|U|1581
9SUM|1|A|A|1582
9SUM|1|A|A|1583
9SUM|1|A|C|1584
9SUM|1|A|U|1585
*
9SUM|1|A|A|1753
9SUM|1|A|G|1754
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain b
- 60S ribosomal protein L27
- Chain i
- 60S ribosomal protein L34-B
Coloring options: