J3_9SUM_018
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- AUUG*CUUACU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- 9SUM|1|A|U|2429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_63968.2
- Basepair signature
- cWW-cWW-F-F-cWW-F-tWH-tHS-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
9SUM|1|A|A|2347
9SUM|1|A|U|2348
9SUM|1|A|U|2349
9SUM|1|A|G|2350
*
9SUM|1|A|C|2427
9SUM|1|A|U|2428
9SUM|1|A|U|2429
9SUM|1|A|A|2430
9SUM|1|A|C|2431
9SUM|1|A|U|2432
*
9SUM|1|A|A|2490
9SUM|1|A|A|2491
9SUM|1|A|G|2492
9SUM|1|A|A|2493
9SUM|1|A|C|2494
9SUM|1|A|A|2495
9SUM|1|A|U|2496
9SUM|1|A|U|2497
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L2-A
- Chain J
- 60S ribosomal protein L8
- Chain P
- Ribosomal protein L15
- Chain k
- 60S ribosomal protein L36
Coloring options: