J3_9SYH_006

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

9SYH|1|A|U|871, 9SYH|1|A|A|873

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|A|C|826
9SYH|1|A|U|827
9SYH|1|A|U|828
9SYH|1|A|G|829
*
9SYH|1|A|C|857
9SYH|1|A|G|858
9SYH|1|A|G|859
9SYH|1|A|A|860
9SYH|1|A|G|861
*
9SYH|1|A|C|868
9SYH|1|A|G|869
9SYH|1|A|U|870
9SYH|1|A|U|871
9SYH|1|A|A|872
9SYH|1|A|A|873
9SYH|1|A|G|874

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain H

Small ribosomal subunit protein uS8

Chain U

Small ribosomal subunit protein bS21