J3_9SYR_007

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CAG*CG(PSU)AG*UCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|1546
9SYR|1|L1|A|1547
9SYR|1|L1|G|1548
*
9SYR|1|L1|C|1580
9SYR|1|L1|G|1581
9SYR|1|L1|PSU|1582
9SYR|1|L1|A|1583
9SYR|1|L1|G|1584
*
9SYR|1|L1|U|1609
9SYR|1|L1|C|1610
9SYR|1|L1|C|1611
9SYR|1|L1|G|1612

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein L37a

Chain La

60S ribosomal protein L8

Chain Li

60S ribosomal protein L19

Chain Lx

60S ribosomal protein L34