J3_9SYR_013

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9SYR|1|L1|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|A|2551
9SYR|1|L1|G|2552
9SYR|1|L1|A|2553
9SYR|1|L1|U|2554
9SYR|1|L1|G|2555
*
9SYR|1|L1|C|2572
9SYR|1|L1|A|2573
9SYR|1|L1|G|2574
9SYR|1|L1|U|2575
*
9SYR|1|L1|A|2757
9SYR|1|L1|G|2758
9SYR|1|L1|G|2759
9SYR|1|L1|G|2760
9SYR|1|L1|U|2761
9SYR|1|L1|G|2762
9SYR|1|L1|U|2763
9SYR|1|L1|A|2764
9SYR|1|L1|A|2765
9SYR|1|L1|A|2766
9SYR|1|L1|U|2767

Current chains

Chain L1

28S rRNA

Nearby chains

Chain Lq

60S ribosomal protein L27