J3_9T0Y_006

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

9T0Y|1|A|U|871, 9T0Y|1|A|A|873

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|A|C|826
9T0Y|1|A|U|827
9T0Y|1|A|U|828
9T0Y|1|A|G|829
*
9T0Y|1|A|C|857
9T0Y|1|A|G|858
9T0Y|1|A|G|859
9T0Y|1|A|A|860
9T0Y|1|A|G|861
*
9T0Y|1|A|C|868
9T0Y|1|A|G|869
9T0Y|1|A|U|870
9T0Y|1|A|U|871
9T0Y|1|A|A|872
9T0Y|1|A|A|873
9T0Y|1|A|G|874

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain H

Small ribosomal subunit protein uS8

Chain U

Small ribosomal subunit protein bS21