J3_9T0Z_011
3D structure
- PDB id
- 9T0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- HPFcold Bound Hibernating C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 9T0Z|1|A|U|1209, 9T0Z|1|A|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9T0Z_011 not in the Motif Atlas
- Homologous match to J3_6CZR_063
- Geometric discrepancy: 0.1784
- The information below is about J3_6CZR_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.1
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9T0Z|1|A|C|986
9T0Z|1|A|U|987
9T0Z|1|A|U|988
9T0Z|1|A|G|989
9T0Z|1|A|A|990
9T0Z|1|A|C|991
9T0Z|1|A|A|992
9T0Z|1|A|U|993
*
9T0Z|1|A|A|1040
9T0Z|1|A|C|1041
9T0Z|1|A|A|1042
9T0Z|1|A|G|1043
*
9T0Z|1|A|C|1207
9T0Z|1|A|U|1208
9T0Z|1|A|U|1209
9T0Z|1|A|A|1210
9T0Z|1|A|C|1211
9T0Z|1|A|G|1212
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain N
- Small ribosomal subunit protein uS14
Coloring options: