J3_9T1G_001

3D structure

PDB id

9T1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-RlmE strain, PTC class 6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

9T1G|1|a|A|2518, 9T1G|1|a|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T1G|1|a|C|2517
9T1G|1|a|A|2518
9T1G|1|a|U|2519
9T1G|1|a|C|2520
*
9T1G|1|a|G|2545
9T1G|1|a|U|2546
9T1G|1|a|A|2547
*
9T1G|1|a|U|2561
9T1G|1|a|U|2562
9T1G|1|a|U|2563
9T1G|1|a|A|2564
9T1G|1|a|A|2565
9T1G|1|a|A|2566
9T1G|1|a|G|2567

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3