J3_9TI5_031
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI5_031 not in the Motif Atlas
- Homologous match to J3_6CZR_023
- Geometric discrepancy: 0.1505
- The information below is about J3_6CZR_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.2
- Basepair signature
- cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9TI5|1|a|C|1074
9TI5|1|a|G|1075
9TI5|1|a|U|1076
9TI5|1|a|C|1077
9TI5|1|a|A|1078
9TI5|1|a|G|1079
*
9TI5|1|a|C|1118
9TI5|1|a|G|1119
9TI5|1|a|C|1120
9TI5|1|a|A|1121
9TI5|1|a|A|1122
9TI5|1|a|C|1123
9TI5|1|a|C|1124
*
9TI5|1|a|G|1197
9TI5|1|a|A|1198
9TI5|1|a|U|1199
9TI5|1|a|G|1200
9TI5|1|a|A|1201
9TI5|1|a|C|1202
9TI5|1|a|G|1203
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain d
- 30S ribosomal protein S3
- Chain f
- 30S ribosomal protein S5
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
- Chain k
- Small ribosomal subunit protein uS10
- Chain o
- 30S ribosomal protein S14 type Z
Coloring options: