J3_9TI6_008
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- 9TI6|1|A|A|1128
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI6_008 not in the Motif Atlas
- Homologous match to J3_6PRV_001
- Geometric discrepancy: 0.2553
- The information below is about J3_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37832.2
- Basepair signature
- cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
9TI6|1|A|G|1099
9TI6|1|A|G|1100
9TI6|1|A|A|1101
*
9TI6|1|A|U|1125
9TI6|1|A|U|1126
9TI6|1|A|U|1127
9TI6|1|A|A|1128
9TI6|1|A|A|1129
9TI6|1|A|A|1130
9TI6|1|A|G|1131
*
9TI6|1|A|C|1146
9TI6|1|A|A|1147
9TI6|1|A|C|1148
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain L
- Large ribosomal subunit protein uL11
Coloring options: