J3_9TI9_016
3D structure
- PDB id
- 9TI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 9TI9|1|A|A|2545, 9TI9|1|A|U|2546
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI9_016 not in the Motif Atlas
- Homologous match to J3_7A0S_011
- Geometric discrepancy: 0.1228
- The information below is about J3_7A0S_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.6
- Basepair signature
- cWW-cWH-cWW-tWH-tSS-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9TI9|1|A|C|2544
9TI9|1|A|A|2545
9TI9|1|A|U|2546
9TI9|1|A|C|2547
*
9TI9|1|A|G|2572
9TI9|1|A|U|2573
9TI9|1|A|U|2574
*
9TI9|1|A|A|2588
9TI9|1|A|U|2589
9TI9|1|A|U|2590
9TI9|1|A|A|2591
9TI9|1|A|A|2592
9TI9|1|A|A|2593
9TI9|1|A|G|2594
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L14
Coloring options: