J3_9UZM_006

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUUU

Length

18 nucleotides

Bulged bases

9UZM|1|2|G|987

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|A|934
9UZM|1|2|U|935
9UZM|1|2|U|936
9UZM|1|2|C|937
*
9UZM|1|2|G|981
9UZM|1|2|G|982
9UZM|1|2|A|983
9UZM|1|2|C|984
9UZM|1|2|C|985
9UZM|1|2|A|986
9UZM|1|2|G|987
9UZM|1|2|A|988
9UZM|1|2|G|989
*
9UZM|1|2|C|996
9UZM|1|2|A|997
9UZM|1|2|U|998
9UZM|1|2|U|999
9UZM|1|2|U|1000

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein eS1

Chain Q

Ribosomal protein S14

Chain b

Small ribosomal subunit protein eS26