J3_9VXN_037
3D structure
- PDB id
- 9VXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- UG*(PSU)GUC*GAUAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXN|1|S2|U|1350
9VXN|1|S2|G|1351
*
9VXN|1|S2|PSU|1360
9VXN|1|S2|G|1361
9VXN|1|S2|U|1362
9VXN|1|S2|C|1363
*
9VXN|1|S2|G|1375
9VXN|1|S2|A|1376
9VXN|1|S2|U|1377
9VXN|1|S2|A|1378
9VXN|1|S2|A|1379
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SA
- Small ribosomal subunit protein uS2
- Chain SC
- Small ribosomal subunit protein uS5
- Chain SR
- Small ribosomal subunit protein eS17
Coloring options: