J3_9W0N_024
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UA*UACCGGUGG*CGG
- Length
- 14 nucleotides
- Bulged bases
- 9W0N|1|3|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9W0N_024 not in the Motif Atlas
- Homologous match to J3_8B0X_003
- Geometric discrepancy: 0.0998
- The information below is about J3_8B0X_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_74074.1
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9W0N|1|3|U|672
9W0N|1|3|A|673
*
9W0N|1|3|U|717
9W0N|1|3|A|718
9W0N|1|3|C|719
9W0N|1|3|C|720
9W0N|1|3|G|721
9W0N|1|3|G|722
9W0N|1|3|U|723
9W0N|1|3|G|724
9W0N|1|3|G|725
*
9W0N|1|3|C|732
9W0N|1|3|G|733
9W0N|1|3|G|734
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain K
- Small ribosomal subunit protein bS6, fully modified isoform
- Chain P
- Small ribosomal subunit protein uS11
- Chain T
- Small ribosomal subunit protein uS15
- Chain W
- Small ribosomal subunit protein bS18
- Chain Z
- Small ribosomal subunit protein bS21
- Chain b
- Large ribosomal subunit protein uL2
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