J3_9Y49_040
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUCUUAG*CGAGAC*GCAAUAA
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y49|1|B2|U|1339
9Y49|1|B2|U|1340
9Y49|1|B2|C|1341
9Y49|1|B2|U|1342
9Y49|1|B2|U|1343
9Y49|1|B2|A|1344
9Y49|1|B2|G|1345
*
9Y49|1|B2|C|1384
9Y49|1|B2|G|1385
9Y49|1|B2|A|1386
9Y49|1|B2|G|1387
9Y49|1|B2|A|1388
9Y49|1|B2|C|1389
*
9Y49|1|B2|G|1481
9Y49|1|B2|C|1482
9Y49|1|B2|A|1483
9Y49|1|B2|A|1484
9Y49|1|B2|U|1485
9Y49|1|B2|A|1486
9Y49|1|B2|A|1487
Current chains
- Chain B2
- 18S rRNA (1786-MER)
Nearby chains
- Chain AC
- 40S ribosomal protein S2
- Chain AD
- 40S ribosomal protein S3
- Chain AQ
- 40S ribosomal protein S16
- Chain AR
- 40S ribosomal protein S17
- Chain AU
- 40S ribosomal protein S20
- Chain Ad
- 40S ribosomal protein S29
Coloring options: