J3_9Y4G_032

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAG*CAG*CUGGAU

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|A|816
9Y4G|1|B2|G|817
9Y4G|1|B2|A|818
9Y4G|1|B2|G|819
*
9Y4G|1|B2|C|829
9Y4G|1|B2|A|830
9Y4G|1|B2|G|831
*
9Y4G|1|B2|C|843
9Y4G|1|B2|U|844
9Y4G|1|B2|G|845
9Y4G|1|B2|G|846
9Y4G|1|B2|A|847
9Y4G|1|B2|U|848

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AJ

40S ribosomal protein S9

Chain AY

40S ribosomal protein S24