J3_9YPY_011

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAU*GCUAAGG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|5|G|1969
9YPY|1|5|A|1970
9YPY|1|5|U|1971
*
9YPY|1|5|G|1995
9YPY|1|5|C|1996
9YPY|1|5|U|1997
9YPY|1|5|A|1998
9YPY|1|5|A|1999
9YPY|1|5|G|2000
9YPY|1|5|G|2001
*
9YPY|1|5|C|2016
9YPY|1|5|A|2017
9YPY|1|5|C|2018

Current chains

Chain 5

28S ribosomal RNA

Nearby chains