J4_1I95_002

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

1I95|1|A|A|203

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_1I95_002 not in the Motif Atlas

Homologous match to J4_4LFB_002

Geometric discrepancy: 0.1447

The information below is about J4_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_88771.1

Basepair signature

cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW

Number of instances in this motif group

1

Unit IDs

1I95|1|A|G|136
1I95|1|A|A|137
1I95|1|A|G|138
*
1I95|1|A|C|172
1I95|1|A|A|173
1I95|1|A|U|174
1I95|1|A|G|175
1I95|1|A|U|176
1I95|1|A|G|177
*
1I95|1|A|C|200
1I95|1|A|A|201
1I95|1|A|A|202
1I95|1|A|A|203
1I95|1|A|G|204
*
1I95|1|A|C|214
1I95|1|A|G|215
1I95|1|A|C|216

Current chains

Chain A

16S RRNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20