J4_23WI_010

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

23WI|1|A|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

23WI|1|A|C|601
23WI|1|A|A|602
23WI|1|A|A|603
23WI|1|A|G|604
*
23WI|1|A|C|624
23WI|1|A|G|625
23WI|1|A|A|626
23WI|1|A|A|627
23WI|1|A|G|628
*
23WI|1|A|C|635
23WI|1|A|G|636
23WI|1|A|A|637
23WI|1|A|G|638
*
23WI|1|A|C|650
23WI|1|A|G|651
23WI|1|A|U|652
23WI|1|A|U|653
23WI|1|A|A|654
23WI|1|A|A|655
23WI|1|A|G|656

Current chains

Chain A

16S rRNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

Large ribosomal subunit protein uL15