J4_23WI_012

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

23WI|1|a|C|183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

23WI|1|a|G|142
23WI|1|a|A|143
23WI|1|a|G|144
*
23WI|1|a|C|178
23WI|1|a|A|179
23WI|1|a|U|180
23WI|1|a|A|181
23WI|1|a|A|182
23WI|1|a|C|183
23WI|1|a|G|184
*
23WI|1|a|C|193
23WI|1|a|C|194
23WI|1|a|A|195
23WI|1|a|A|196
23WI|1|a|A|197
23WI|1|a|G|198
*
23WI|1|a|U|219
23WI|1|a|G|220
23WI|1|a|C|221

Current chains

Chain a

RNA (1539-MER)

Nearby chains

Chain t

Small ribosomal subunit protein bS20