J4_30QZ_005

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

CGAUAAA*UC*GCUU*AG

Length

15 nucleotides

Bulged bases

30QZ|1|a|G|1271, 30QZ|1|a|A|1272, 30QZ|1|a|U|1273, 30QZ|1|a|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30QZ|1|a|C|1270
30QZ|1|a|G|1271
30QZ|1|a|A|1272
30QZ|1|a|U|1273
30QZ|1|a|A|1274
30QZ|1|a|A|1275
30QZ|1|a|A|1276
*
30QZ|1|a|U|1294
30QZ|1|a|C|1295
*
30QZ|1|a|G|1645
30QZ|1|a|C|1646
30QZ|1|a|U|1647
30QZ|1|a|U|1648
*
30QZ|1|a|A|2009
30QZ|1|a|G|2010

Current chains

Chain a

23S rRNA

Nearby chains

Chain m

Large ribosomal subunit protein bL17

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32