J4_30RA_014

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

30RA|1|a|A|2288, 30RA|1|a|G|2382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RA|1|a|C|2285
30RA|1|a|G|2286
30RA|1|a|A|2287
30RA|1|a|A|2288
30RA|1|a|G|2289
*
30RA|1|a|U|2343
30RA|1|a|U|2344
30RA|1|a|G|2345
30RA|1|a|A|2346
30RA|1|a|C|2347
*
30RA|1|a|G|2370
30RA|1|a|G|2371
30RA|1|a|U|2372
*
30RA|1|a|A|2381
30RA|1|a|G|2382
30RA|1|a|G|2383

Current chains

Chain a

23S rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL33

Chain 2

Large ribosomal subunit protein bL35

Chain n

Large ribosomal subunit protein uL18

Chain v

Large ribosomal subunit protein bL27