J4_3CXC_003
3D structure
- PDB id
- 3CXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAGCGAUAG*CG*CUGUC*GG
- Length
- 18 nucleotides
- Bulged bases
- 3CXC|1|0|G|1378, 3CXC|1|0|U|1380, 3CXC|1|0|A|1381
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_3CXC_003 not in the Motif Atlas
- Homologous match to J4_4V9F_003
- Geometric discrepancy: 0.0408
- The information below is about J4_4V9F_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_75426.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
3CXC|1|0|C|1374
3CXC|1|0|A|1375
3CXC|1|0|G|1376
3CXC|1|0|C|1377
3CXC|1|0|G|1378
3CXC|1|0|A|1379
3CXC|1|0|U|1380
3CXC|1|0|A|1381
3CXC|1|0|G|1382
*
3CXC|1|0|C|1400
3CXC|1|0|G|1401
*
3CXC|1|0|C|1721
3CXC|1|0|U|1722
3CXC|1|0|G|1723
3CXC|1|0|U|1724
3CXC|1|0|C|1725
*
3CXC|1|0|G|2050
3CXC|1|0|G|2051
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain O
- RIBOSOMAL PROTEIN L19E
- Chain Q
- RIBOSOMAL PROTEIN L22
- Chain W
- RIBOSOMAL PROTEIN L31E
Coloring options: