J4_3F2X_001

3D structure

PDB id

3F2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the FMN riboswitch bound to FMN, Cs+ soak.

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

CGGGGCAG*CGACC*GAC*GGAUGAGAG

Length

25 nucleotides

Bulged bases

3F2X|1|X|U|100

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

FMN riboswitch junction

Broad Annotation

No text annotation

Motif group

J4_70672.1

Basepair signature

cWW-tSH-F-F-F-F-F-F-cSW-F-tHS-cWW-cWW-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

3F2X|1|X|C|8
3F2X|1|X|G|9
3F2X|1|X|G|10
3F2X|1|X|G|11
3F2X|1|X|G|12
3F2X|1|X|C|13
3F2X|1|X|A|14
3F2X|1|X|G|15
*
3F2X|1|X|C|27
3F2X|1|X|G|28
3F2X|1|X|A|29
3F2X|1|X|C|30
3F2X|1|X|C|31
*
3F2X|1|X|G|84
3F2X|1|X|A|85
3F2X|1|X|C|86
*
3F2X|1|X|G|97
3F2X|1|X|G|98
3F2X|1|X|A|99
3F2X|1|X|U|100
3F2X|1|X|G|101
3F2X|1|X|A|102
3F2X|1|X|G|103
3F2X|1|X|A|104
3F2X|1|X|G|105

Current chains

Chain X

FMN riboswitch

Nearby chains