J4_3J92_005

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

3J92|1|5|A|2366, 3J92|1|5|U|2369, 3J92|1|5|U|2828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|C|2365
3J92|1|5|A|2366
3J92|1|5|A|2367
3J92|1|5|A|2368
3J92|1|5|U|2369
3J92|1|5|A|2370
3J92|1|5|U|2371
*
3J92|1|5|A|2389
3J92|1|5|G|2390
3J92|1|5|G|2391
*
3J92|1|5|C|2824
3J92|1|5|A|2825
3J92|1|5|U|2826
3J92|1|5|G|2827
3J92|1|5|U|2828
3J92|1|5|U|2829
*
3J92|1|5|A|3856
3J92|1|5|G|3857

Current chains

Chain 5

28S rRNA

Nearby chains

Chain P

uL22

Chain R

eL19

Chain d

eL31