J4_3J92_012

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|G|4587
3J92|1|5|U|4588
3J92|1|5|A|4589
3J92|1|5|A|4590
*
3J92|1|5|U|4620
3J92|1|5|C|4621
*
3J92|1|5|G|4676
3J92|1|5|U|4677
3J92|1|5|G|4678
*
3J92|1|5|C|4712
3J92|1|5|G|4713
3J92|1|5|C|4714
3J92|1|5|C|4715

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain O

uL13

Chain V

uL14