J4_4CUV_006

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GACUG*CAUAG*UGAUU*AUUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUV|1|1|G|2130
4CUV|1|1|A|2131
4CUV|1|1|C|2132
4CUV|1|1|U|2133
4CUV|1|1|G|2134
*
4CUV|1|1|C|2146
4CUV|1|1|A|2147
4CUV|1|1|U|2148
4CUV|1|1|A|2149
4CUV|1|1|G|2150
*
4CUV|1|1|U|2186
4CUV|1|1|G|2187
4CUV|1|1|A|2188
4CUV|1|1|U|2189
4CUV|1|1|U|2190
*
4CUV|1|1|A|2317
4CUV|1|1|U|2318
4CUV|1|1|U|2319
4CUV|1|1|A|2320
4CUV|1|1|A|2321
4CUV|1|1|C|2322

Current chains

Chain 1

25S RRNA

Nearby chains