J4_4LEL_002

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

4LEL|1|QA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4LEL_002 not in the Motif Atlas

Homologous match to J4_4LFB_002

Geometric discrepancy: 0.121

The information below is about J4_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_88771.1

Basepair signature

cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW

Number of instances in this motif group

1

Unit IDs

4LEL|1|QA|G|142
4LEL|1|QA|A|143
4LEL|1|QA|G|144
*
4LEL|1|QA|C|178
4LEL|1|QA|A|179
4LEL|1|QA|U|180
4LEL|1|QA|G|181
4LEL|1|QA|U|182
4LEL|1|QA|G|183
*
4LEL|1|QA|C|194
4LEL|1|QA|A|195
4LEL|1|QA|A|196
4LEL|1|QA|A|197
4LEL|1|QA|G|198
*
4LEL|1|QA|C|219
4LEL|1|QA|G|220
4LEL|1|QA|C|221

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20