J4_4P70_002

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

4P70|1|QA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4P70_002 not in the Motif Atlas

Homologous match to J4_4LFB_002

Geometric discrepancy: 0.1178

The information below is about J4_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_88771.1

Basepair signature

cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW

Number of instances in this motif group

1

Unit IDs

4P70|1|QA|G|142
4P70|1|QA|A|143
4P70|1|QA|G|144
*
4P70|1|QA|C|178
4P70|1|QA|A|179
4P70|1|QA|U|180
4P70|1|QA|G|181
4P70|1|QA|U|182
4P70|1|QA|G|183
*
4P70|1|QA|C|194
4P70|1|QA|A|195
4P70|1|QA|A|196
4P70|1|QA|A|197
4P70|1|QA|G|198
*
4P70|1|QA|C|219
4P70|1|QA|G|220
4P70|1|QA|C|221

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20