J4_4UG0_009

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUG*CGG*UCUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

4UG0|1|L5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|C|3696
4UG0|1|L5|U|3697
4UG0|1|L5|G|3698
*
4UG0|1|L5|C|3752
4UG0|1|L5|G|3753
4UG0|1|L5|G|3754
*
4UG0|1|L5|U|3770
4UG0|1|L5|C|3771
4UG0|1|L5|U|3772
4UG0|1|L5|U|3773
4UG0|1|L5|A|3774
4UG0|1|L5|A|3775
4UG0|1|L5|G|3776
4UG0|1|L5|G|3777
4UG0|1|L5|U|3778
4UG0|1|L5|A|3779
4UG0|1|L5|G|3780
*
4UG0|1|L5|U|3814
4UG0|1|L5|G|3815
4UG0|1|L5|A|3816
4UG0|1|L5|A|3817
4UG0|1|L5|U|3818
4UG0|1|L5|G|3819

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S RIBOSOMAL PROTEIN L8

Chain Ln

60S RIBOSOMAL PROTEIN L41

Chain S2

Small subunit ribosomal RNA; SSU rRNA