J4_4UG0_011

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

4UG0|1|L5|U|4677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|4587
4UG0|1|L5|U|4588
4UG0|1|L5|A|4589
4UG0|1|L5|A|4590
*
4UG0|1|L5|U|4620
4UG0|1|L5|C|4621
*
4UG0|1|L5|G|4676
4UG0|1|L5|U|4677
4UG0|1|L5|G|4678
*
4UG0|1|L5|C|4712
4UG0|1|L5|G|4713
4UG0|1|L5|C|4714
4UG0|1|L5|C|4715

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S RIBOSOMAL PROTEIN L3

Chain LO

60S RIBOSOMAL PROTEIN L13A

Chain LV

60S RIBOSOMAL PROTEIN L23