J4_4V6Z_009
3D structure
- PDB id
- 4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- CGAUAAA*UC*GCUU*AG
- Length
- 15 nucleotides
- Bulged bases
- 4V6Z|1|BA|G|1271, 4V6Z|1|BA|A|1272, 4V6Z|1|BA|U|1273, 4V6Z|1|BA|A|1275, 4V6Z|1|BA|U|1647
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V6Z_009 not in the Motif Atlas
- Homologous match to J4_7A0S_004
- Geometric discrepancy: 0.4306
- The information below is about J4_7A0S_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_64571.6
- Basepair signature
- cWW-F-cWW-tSS-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V6Z|1|BA|C|1270
4V6Z|1|BA|G|1271
4V6Z|1|BA|A|1272
4V6Z|1|BA|U|1273
4V6Z|1|BA|A|1274
4V6Z|1|BA|A|1275
4V6Z|1|BA|A|1276
*
4V6Z|1|BA|U|1294
4V6Z|1|BA|C|1295
*
4V6Z|1|BA|G|1645
4V6Z|1|BA|C|1646
4V6Z|1|BA|U|1647
4V6Z|1|BA|U|1648
*
4V6Z|1|BA|A|2009
4V6Z|1|BA|G|2010
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B0
- 50S ribosomal protein L32
- Chain BN
- 50S ribosomal protein L17
- Chain BS
- 50S ribosomal protein L22
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