J4_4V74_004

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4V74|1|AA|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4V74_004 not in the Motif Atlas

Homologous match to J4_5J7L_002

Geometric discrepancy: 0.3915

The information below is about J4_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_01665.1

Basepair signature

cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

4V74|1|AA|G|142
4V74|1|AA|A|143
4V74|1|AA|G|144
*
4V74|1|AA|C|178
4V74|1|AA|A|179
4V74|1|AA|U|180
4V74|1|AA|A|181
4V74|1|AA|A|182
4V74|1|AA|C|183
4V74|1|AA|G|184
*
4V74|1|AA|C|193
4V74|1|AA|C|194
4V74|1|AA|A|195
4V74|1|AA|A|196
4V74|1|AA|A|197
4V74|1|AA|G|198
*
4V74|1|AA|U|219
4V74|1|AA|G|220
4V74|1|AA|C|221

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20