J4_4V78_011
3D structure
- PDB id
- 4V78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 20 Å
Loop
- Sequence
- UC*GGUGAG*CU*AAUCGUA
- Length
- 17 nucleotides
- Bulged bases
- 4V78|1|BA|G|1341
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V78_011 not in the Motif Atlas
- Homologous match to J4_5J7L_023
- Geometric discrepancy: 0.3474
- The information below is about J4_5J7L_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_10313.5
- Basepair signature
- cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V78|1|BA|U|1313
4V78|1|BA|C|1314
*
4V78|1|BA|G|1338
4V78|1|BA|G|1339
4V78|1|BA|U|1340
4V78|1|BA|G|1341
4V78|1|BA|A|1342
4V78|1|BA|G|1343
*
4V78|1|BA|C|1404
4V78|1|BA|U|1405
*
4V78|1|BA|A|1597
4V78|1|BA|A|1598
4V78|1|BA|U|1599
4V78|1|BA|C|1600
4V78|1|BA|G|1601
4V78|1|BA|U|1602
4V78|1|BA|A|1603
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BT
- 50S ribosomal protein L23
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