J4_4V7A_003

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4V7A|1|AA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4V7A_003 not in the Motif Atlas

Homologous match to J4_5J7L_002

Geometric discrepancy: 0.3953

The information below is about J4_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_01665.1

Basepair signature

cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

4V7A|1|AA|G|142
4V7A|1|AA|A|143
4V7A|1|AA|G|144
*
4V7A|1|AA|C|178
4V7A|1|AA|A|179
4V7A|1|AA|U|180
4V7A|1|AA|A|181
4V7A|1|AA|A|182
4V7A|1|AA|C|183
4V7A|1|AA|G|184
*
4V7A|1|AA|C|193
4V7A|1|AA|C|194
4V7A|1|AA|A|195
4V7A|1|AA|A|196
4V7A|1|AA|A|197
4V7A|1|AA|G|198
*
4V7A|1|AA|U|219
4V7A|1|AA|G|220
4V7A|1|AA|C|221

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20