J4_4V8J_001
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GAGUAACG*UC*GUAG*CC
- Length
- 16 nucleotides
- Bulged bases
- 4V8J|1|AA|C|114
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V8J_001 not in the Motif Atlas
- Homologous match to J4_4LFB_001
- Geometric discrepancy: 0.087
- The information below is about J4_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_35578.3
- Basepair signature
- cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V8J|1|AA|G|108
4V8J|1|AA|A|109
4V8J|1|AA|G|110
4V8J|1|AA|U|111
4V8J|1|AA|A|112
4V8J|1|AA|A|113
4V8J|1|AA|C|114
4V8J|1|AA|G|115
*
4V8J|1|AA|U|234
4V8J|1|AA|C|235
*
4V8J|1|AA|G|281
4V8J|1|AA|U|282
4V8J|1|AA|A|283
4V8J|1|AA|G|284
*
4V8J|1|AA|C|306
4V8J|1|AA|C|307
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AQ
- 30S ribosomal protein S17
Coloring options: