J4_4V91_011
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUAAG*UUGAU*ACC*GUG
- Length
- 16 nucleotides
- Bulged bases
- 4V91|1|1|A|2657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V91_011 not in the Motif Atlas
- Homologous match to J4_8CRE_008
- Geometric discrepancy: 0.1061
- The information below is about J4_8CRE_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_04930.6
- Basepair signature
- cWW-F-F-tWW-tHH-cWW-cWW-cHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V91|1|1|C|2654
4V91|1|1|U|2655
4V91|1|1|A|2656
4V91|1|1|A|2657
4V91|1|1|G|2658
*
4V91|1|1|U|2712
4V91|1|1|U|2713
4V91|1|1|G|2714
4V91|1|1|A|2715
4V91|1|1|U|2716
*
4V91|1|1|A|2740
4V91|1|1|C|2741
4V91|1|1|C|2742
*
4V91|1|1|G|2751
4V91|1|1|U|2752
4V91|1|1|G|2753
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain D
- UL18
- Chain T
- EL21
- Chain b
- EL29
- Chain o
- EL42
Coloring options: