J4_4WPO_009
3D structure
- PDB id
- 4WPO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CAAAG*CUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 4WPO|1|AA|A|2300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4WPO_009 not in the Motif Atlas
- Homologous match to J4_9DFE_009
- Geometric discrepancy: 0.1029
- The information below is about J4_9DFE_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WPO|1|AA|C|2297
4WPO|1|AA|A|2298
4WPO|1|AA|A|2299
4WPO|1|AA|A|2300
4WPO|1|AA|G|2301
*
4WPO|1|AA|C|2355
4WPO|1|AA|U|2356
4WPO|1|AA|G|2357
4WPO|1|AA|A|2358
4WPO|1|AA|C|2359
*
4WPO|1|AA|G|2382
4WPO|1|AA|G|2383
4WPO|1|AA|G|2384
*
4WPO|1|AA|C|2393
4WPO|1|AA|G|2394
4WPO|1|AA|G|2395
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain A0
- 50S ribosomal protein L27
- Chain A6
- 50S ribosomal protein L33
- Chain A8
- 50S ribosomal protein L35
- Chain AS
- 50S ribosomal protein L18
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